PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang10g07150.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 178aa    MW: 21151.3 Da    PI: 9.7607
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang10g07150.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.31.2e-3197155159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYG K+vk+++fprsYYrC+++gC+vkk+++r ++d+++v++tYeg+H h+
  Vang10g07150.1  97 LDDGYRWRKYGEKSVKNNKFPRSYYRCSYRGCNVKKQIQRHSKDEEIVVTTYEGTHSHP 155
                     59********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.7E-3383155IPR003657WRKY domain
SuperFamilySSF1182902.75E-2889156IPR003657WRKY domain
PROSITE profilePS5081129.65492157IPR003657WRKY domain
SMARTSM007746.1E-3697156IPR003657WRKY domain
PfamPF031063.9E-2698155IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MRWRILIHHR VYVACGESCS TSPDLLTCLP PSCFTFFQFI YSIIYISSPL FLLQWTKIKC  60
CSSSPSPSYF KLPRHHVREQ MKHRRFAFQT RSQVDILDDG YRWRKYGEKS VKNNKFPRSY  120
YRCSYRGCNV KKQIQRHSKD EEIVVTTYEG THSHPVEKTS ESFEQILRNH HIYSLTL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A2e-2687154774Probable WRKY transcription factor 4
1wj2_A2e-2687154774Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014508459.11e-70PREDICTED: probable WRKY transcription factor 75
SwissprotQ9FYA26e-49WRK75_ARATH; Probable WRKY transcription factor 75
TrEMBLA0A0L9TIN27e-67A0A0L9TIN2_PHAAN; Uncharacterized protein
TrEMBLA0A0S3QXS67e-67A0A0S3QXS6_PHAAN; Uncharacterized protein
STRINGGLYMA08G01430.13e-59(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF115634110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.15e-50WRKY DNA-binding protein 75